Classification of primary Glioblastoma cell lines into molecular subtypes

doi:10.21203/rs.3.pex-1218/v1

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Method Article

Michelangelo Cordenonsi, Silvio Bicciato, Stefano Piccolo

Michelangelo Cordenonsi

Corresponding Author

Silvio Bicciato

Corresponding Author

Stefano Piccolo

Corresponding Author

DOI:

10.21203/rs.3.pex-1218/v1

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This protocol provides the details for the classification of the primary Glioblastoma cell lines HuTu10 and HuTu13 into the Glioblastoma molecular subtypes using microarray data.

Keywords

Glioblastoma, primary cell lines, molecular subtypes

This is a list of supplementary files associated with this preprint. Click to download.

SupplementaryTable1.xlsx
Supplementary Data Table 1: centroids as determined by the ClaNC classifier trained using gene expression data and molecular subclasses of the GBM TCGA data set

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Subject Areas

Cancer

Computational biology and bioinformatics

Cell Biology

Associated Publications

Single-cell analyses reveal YAP/TAZ as regulators of stemness and cell plasticity in glioblastoma
by Martina Castellan, Alberto Guarnieri, Atsushi Fujimura, +14
Nature Cancer (07 December, 2020)

An open repository of community-contributed protocols sponsored by Nature Research.

Learn more about Protocol Exchange

Method Article

Michelangelo Cordenonsi, Silvio Bicciato, Stefano Piccolo

Michelangelo Cordenonsi

Corresponding Author

Silvio Bicciato

Corresponding Author

Stefano Piccolo

Corresponding Author

Version History

CURRENT STATUS: Posted

Version 1

Posted 09 Dec, 2020

No community comments so far

MetricsComments: 0HTML Views: ...

Subject Areas

Cancer

Computational biology and bioinformatics

Cell Biology

DOI:

10.21203/rs.3.pex-1218/v1

Download PDF

License:

This work is licensed under a CC BY 4.0 License. Read Full License

This protocol provides the details for the classification of the primary Glioblastoma cell lines HuTu10 and HuTu13 into the Glioblastoma molecular subtypes using microarray data.

This is a list of supplementary files associated with this preprint. Click to download.

SupplementaryTable1.xlsx
Supplementary Data Table 1: centroids as determined by the ClaNC classifier trained using gene expression data and molecular subclasses of the GBM TCGA data set

Associated Publications

Single-cell analyses reveal YAP/TAZ as regulators of stemness and cell plasticity in glioblastoma
by Martina Castellan, Alberto Guarnieri, Atsushi Fujimura, +14
Nature Cancer (07 December, 2020)

An open repository of community-contributed protocols sponsored by Nature Research.

Learn more about Protocol Exchange

Method Article

Michelangelo Cordenonsi, Silvio Bicciato, Stefano Piccolo

Michelangelo Cordenonsi

Corresponding Author

Silvio Bicciato

Corresponding Author

Stefano Piccolo

Corresponding Author

DOI:

10.21203/rs.3.pex-1218/v1

Download PDF

License:

This work is licensed under a CC BY 4.0 License. Read Full License

Abstract

Keywords

Glioblastoma, primary cell lines, molecular subtypes

Introduction

Procedure

References

Supplementary Files

Comments

Version History

CURRENT STATUS: Posted

Version 1

No community comments so far

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Subject Areas

Cancer

Computational biology and bioinformatics

Cell Biology

Associated Publications

Single-cell analyses reveal YAP/TAZ as regulators of stemness and cell plasticity in glioblastoma

by Martina Castellan, Alberto Guarnieri, Atsushi Fujimura, +14

Nature Cancer (07 December, 2020)

An open repository of community-contributed protocols sponsored by Nature Research.

Learn more about Protocol Exchange

Method Article

Michelangelo Cordenonsi, Silvio Bicciato, Stefano Piccolo

Michelangelo Cordenonsi

Corresponding Author

Silvio Bicciato

Corresponding Author

Stefano Piccolo

Corresponding Author

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Peer Review Timeline

Version History

CURRENT STATUS: Posted

Version 1

No community comments so far

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Metrics

Comments: 0

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Subject Areas

Subject Areas

Cancer

Computational biology and bioinformatics

Cell Biology

DOI & PDF

DOI:

10.21203/rs.3.pex-1218/v1

Download PDF

License

License:

This work is licensed under a CC BY 4.0 License. Read Full License

Declarations

Abstract

Introduction

Procedure

References

Supplementary Files

Comments

Related Articles

Associated Publications

Single-cell analyses reveal YAP/TAZ as regulators of stemness and cell plasticity in glioblastoma