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Method Article
Marko Premzl
The Australian National University Alumni
Corresponding Author
ORCiD: https://orcid.org/0000-0002-3362-689X
License:
This work is licensed under a CC BY 4.0 License. Read Full License
The eutherian genomics momentum greatly advanced biological and medical sciences. Yet, future revisions and updates of eutherian genomic sequence data sets were expected, due to potential genomic sequence errors and incompleteness of genomic sequences. The eutherian comparative genomic analysis protocol was established as guidance in protection against potential genomic sequence errors in public eutherian genomic sequence assemblies. The protocol revised, updated and published 14 major eutherian gene data sets, including 2615 complete coding sequences deposited in European Nucleotide Archive as curated third party data gene data sets under accession numbers: FR734011-FR734074, HF564658-HF564785, HF564786-HF564815, HG328835-HG329089, HG426065-HG426183, HG931734-HG931849, LM644135-LM644234, LN874312-LN874522, LT548096-LT548244, LT631550-LT631670, LT962964-LT963174, LT990249-LT990597, LR130242-LR130508 and LR760818-LR761312.
Keywords
comparative genomics, Eutheria, gene data set, protein molecular evolution, RRID:SCR_014401
No conflicting financial interests were declared.
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- 20210123Eutheriancomparativegenomicanalysisprotocolflowchart.pdf
Eutherian comparative genomic analysis protocol flowchart
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Version History
CURRENT STATUS: Published
View the published article at Protocol Exchange.
Version 4
Posted 28 Jan, 2021
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Subject Areas
Genetics
Associated Publications
Method Article
Marko Premzl
The Australian National University Alumni
Corresponding Author
ORCiD: https://orcid.org/0000-0002-3362-689X
Version History
CURRENT STATUS: Published
View the published article at Protocol Exchange.
Version 4
Posted 28 Jan, 2021
No community comments so far
No comments provided
No comments provided
No comments provided
Metrics
Comments: 0
HTML Views: ...
Subject Areas
Genetics
License:
This work is licensed under a CC BY 4.0 License. Read Full License
View the published article at Protocol Exchange.
The eutherian genomics momentum greatly advanced biological and medical sciences. Yet, future revisions and updates of eutherian genomic sequence data sets were expected, due to potential genomic sequence errors and incompleteness of genomic sequences. The eutherian comparative genomic analysis protocol was established as guidance in protection against potential genomic sequence errors in public eutherian genomic sequence assemblies. The protocol revised, updated and published 14 major eutherian gene data sets, including 2615 complete coding sequences deposited in European Nucleotide Archive as curated third party data gene data sets under accession numbers: FR734011-FR734074, HF564658-HF564785, HF564786-HF564815, HG328835-HG329089, HG426065-HG426183, HG931734-HG931849, LM644135-LM644234, LN874312-LN874522, LT548096-LT548244, LT631550-LT631670, LT962964-LT963174, LT990249-LT990597, LR130242-LR130508 and LR760818-LR761312.
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