GPS: A computational protocol for kinase-specific phosphorylation site prediction

doi:10.1038/nprot.2007.219

This is a preprint, a preliminary version of a manuscript that has not completed peer review at a journal. Research Square does not conduct peer review prior to posting preprints. The posting of a preprint on this server should not be interpreted as an endorsement of its validity or suitability for dissemination as established information or for guiding clinical practice.

Method Article

GPS: A computational protocol for kinase-specific phosphorylation site prediction

Yu Xue, Fengfeng Zhou, Ying Xu, Xuebiao Yao

Yu Xue

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

Fengfeng Zhou

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Ying Xu

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Xuebiao Yao

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

DOI:

10.1038/nprot.2007.219

Download PDF

Figure 1

Figure 2

Figure 3

M Aslam

commented on 31 March, 2010

The links given in the article are dead.

M Aslam

commented on 31 March, 2010

The links given in the article are dead.

Badges

Prescreen

History

CURRENT STATUS: Posted

Version 1

Posted 11 May, 2007

Community comments: 2

Metrics

Comments: 2

HTML Views: ...

Subject Areas

Biochemistry

Computational biology and bioinformatics

Learn more about our company.

About Us

This is a preprint. It has not completed peer review.

Method Article

GPS: A computational protocol for kinase-specific phosphorylation site prediction

Yu Xue, Fengfeng Zhou, Ying Xu, Xuebiao Yao

Yu Xue

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

Fengfeng Zhou

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Ying Xu

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Xuebiao Yao

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

Badges

Prescreen

History

CURRENT STATUS: Posted

Version 1

Posted 11 May, 2007

Community comments: 2

MetricsComments: 2HTML Views: ...

Subject Areas

Biochemistry

Computational biology and bioinformatics

DOI:

10.1038/nprot.2007.219

Download PDF

Figure 1

Figure 2

Figure 3

M Aslam

commented on 31 March, 2010

The links given in the article are dead.

M Aslam

commented on 31 March, 2010

The links given in the article are dead.

Method Article

GPS: A computational protocol for kinase-specific phosphorylation site prediction

Yu Xue, Fengfeng Zhou, Ying Xu, Xuebiao Yao

Yu Xue

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

Fengfeng Zhou

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Ying Xu

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Xuebiao Yao

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

DOI:

10.1038/nprot.2007.219

Download PDF

Figures

Introduction

Reagents

Equipment

Procedure

Timing

Critical Steps

Anticipated Results

References

Acknowledgements

Comments (2)

M Aslam

commented on 31 March, 2010

M Aslam

commented on 31 March, 2010

Badges

Prescreen

This manuscript passed our Prescreen assessment

Complete author information

Appropriate declaration statements

Potential risks to human health

Prescreen

History

CURRENT STATUS: Posted

Version 1

Community comments: 2

Metrics

Comments: 2

HTML Views: ...

Subject Areas

Biochemistry

Computational biology and bioinformatics

Learn more about our company.

This is a preprint. It has not completed peer review.

Method Article

GPS: A computational protocol for kinase-specific phosphorylation site prediction

Yu Xue, Fengfeng Zhou, Ying Xu, Xuebiao Yao

Yu Xue

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

Fengfeng Zhou

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Ying Xu

Computational Systems Biology Laboratory, Department of Biochemical and Molecular Biology and Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA

Xuebiao Yao

Laboratory of Cellular Dynamics, Hefei National Laboratory for Physical Sciences, and the University of Science and Technology of China, Hefei, China 230027

Badges

Badges

Prescreen

This manuscript passed our Prescreen assessment

Complete author information

Appropriate declaration statements

Potential risks to human health

Prescreen

Peer Review Timeline

History

CURRENT STATUS: Posted

Version 1

Community comments: 2

Metrics

Metrics

Comments: 2

HTML Views: ...

Subject Areas

Subject Areas

Biochemistry

Computational biology and bioinformatics